Project Aim
The aim is to address some open issues (or at least lay out a detailed description of how to address them), see the Goals section below.
The overal goals are to improve the workflow and move it again closer to be fully compatible with nf-core.
Warning
This group will work on a pipeline that is currently not developed actively within nf-core, but aligned to the nf-core tools template.
Goals (with recommended experience levels)
See the issue with the link below here:
- Check linting errors https://github.com/bigbio/quantms/issues/593 (beginner, medium)
- Update schema and make it compatible with seqera’s interface https://github.com/bigbio/quantms/pull/590 (beginner, medium)
- Find parameter which were actually used, see issue https://github.com/bigbio/quantms/issues/591 (expert)
- Add protein quantification, see issue https://github.com/bigbio/quantms/issues/592 (medium, expert)
- see what else would be needed to achieve updating the nf-core pipeline version (medium, expert)
